Dear All,
I am new to Galaxy!
When I tried to manipulate mt fasta sequences from RNA-Seq, I just add >1,
>2...>100 etc!
Right now, I am trying to add libraryA to all of the sequences like
>libraryA_1, >libraryA_2.>libraryA_100. I can not figure out how
to do it on Galaxy.
Thanks very much, Ross, for your reply and tips!
I've made FastQC to work and will check for the other dependencies.
Best regards,
Antonio
-Mensagem original-
De: Ross [mailto:ross.laza...@gmail.com]
Enviada em: domingo, 25 de setembro de 2011 09:32
Para: Antonio Ribeiro
Cc: galaxy-dev@
Hi, Antonio - yes, that's right - FastQC is not 'bundled' and has to
be obtained from the tool authors - we just provide a wrapper to make
it work inside Galaxy.
The Galaxy distribution includes code for some of the inbuilt tools
like the fastq groomer, but most of the distribution tool wrappers
r
Matthew J. Thomas u.washington.edu> writes:
>
>
>
> Hello,
>
> I am working on a local install of Galaxy and when running a test data set I
get this error when invoking the Fastqc commans:
>
> /home/mnkyboy/galaxy-dist/tools/rgenetics/rgFastQC.py", line 20
> class FastQC():
> ^
> SyntaxEr
