Re: [galaxy-dev] Quota will not decrease with permanent delete

2012-01-16 Thread graham etherington (TSL)
Hi Nate, We are getting quite large discrepancies between 'Size on disk' and 'Usage' numbers, so I've run the scripts/set_user_disk_usage.py script. When I run it, some of the 'old usage' numbers are negative numbers, e.g. User1 old usage: -226417886261, new usage: 139894688577 User2 old usage:

Re: [galaxy-dev] Quota will not decrease with permanent delete

2012-01-16 Thread Peter Cock
On Mon, Jan 16, 2012 at 1:20 PM, graham etherington (TSL) graham.ethering...@sainsbury-laboratory.ac.uk wrote: Hi Nate, We are getting quite large discrepancies between 'Size on disk' and 'Usage' numbers, so I've run the scripts/set_user_disk_usage.py script. When I run it, some of the 'old

[galaxy-dev] how to set FTP quota?

2012-01-16 Thread Leon Mei
Dear Galaxy team, We just installed ProFTPd (the same as Galaxy Main) on our Galaxy server. Now we would like to implement a FTP quota. I am wondering how Galaxy main handles this. Could you give us some hints? And does the disk quota counting script include the FTP directory? Thanks very much,

Re: [galaxy-dev] An error occurred...

2012-01-16 Thread Jeremy Goecks
Milos, Can you share your history with me (Options - Share or Publish - share with a user -- my email address) and I'll take a look. Thanks, J. On Jan 16, 2012, at 12:46 PM, Milos Busarcevic wrote: Hi, I've got this message after trying to run Cufflinks on the Main instance: Server

[galaxy-dev] importing large files into local instance

2012-01-16 Thread Joshua Gross
Hello all-- We have set up a local version of Galaxy on our own server. On the same computer, we have a couple ~27 GB fastq files we want to use in Galaxy, but we have not figured out how to import them. Since they are on the same HDD, we imagine that there is a way to simply copy them into