[galaxy-dev] Installing Galaxy on Mac OS X 10.7: pyglet issue

Hi folks, I'm trying to install Galaxy locally on my Mac running OS X 10.7 and Python 2.7.3. After cloning the repository and running sh run.sh the first time, the following error occurs: [Fetches series of eggs…] Fetch successful. Traceback (most recent call last): File

[galaxy-dev] bowtie -X

Hi, I noticed that there is a parameter: Maximum insert size for valid paired-end alignments (-X) for bowtie on Galaxy. The default value on Galaxy is -X 1000. I was wondering if this is the default value we should use ? Or we need to change it to another value ? Thanks a lot. Jianpeng

[galaxy-dev] Error when using the Compare Two Datasets tool

Hi Galaxy Community, I have recently setup a small local instance of Galaxy and, when trying to replicate the quickie 15 (about 454 Mapping with Lastz) steps, but using real 454 data, got this error in the execution of the Comparing two datasets tool. Would anyone have any hint about how to solve