Hi Everyone,
Just wrote a blog post for my Week1 tasks and Week 2 to-dos:
http://galaxy-gsoc2013.blogspot.in/2013/06/week-1-accomplishments-and-week-2-plans.html
I am maintaining a work log in this doc :
https://docs.google.com/document/d/1VCKCpKW6C_Tt1DYWi43GAN_Jo-nebkkj8Ctq7WLIZFM/edit
If
Hi Dan,
Thanks for the help. The Galaxy missing tools are now loaded and working as
expected.
Best regards,
Marco
On Thu, Jun 20, 2013 at 3:36 PM, Daniel Blankenberg d...@bx.psu.edu wrote:
Hi Marco,
You'll need to enable some missing tool data tables in
tool_data_table_conf.xml. i.e.
Hi,
I want to enable option auto option for some format ..how will i proceed . I
have alreadu added the format in galaxy ., which works without auto option.
Regards
shashi
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After using tools to convert a SAM to a BAM file, I am trying to filter the
BAM pileup. However, the filter BAM tool is not picking up on the dataset
that I just created. It should show up under 10 column pileup, but an error
message is saying History does not include a dataset of the required
Hi Andrew,
Is this on a local instance or the public Main Galaxy instance at
usegalaxy.org (https://main.g2.bx.psu.edu)?
Also, the exact tools being used and the order is not clear. Maybe a
step is missing from what is listed? (I am just guessing) If you are
using the public Main instance,
Hi Andrew,
If you want to run the tool Filter pileup on coverage and SNPs on
dataset #21, change the datatype to be pileup. Then it will show up
under the list of inputs. Be sure to set the forms options for a
10-column pileup input when you run it.
Change the datatype by clicking on the
On Mon, Jun 24, 2013 at 3:39 PM, shashi shekhar me_shash...@yahoo.co.in wrote:
Hi,
I want to enable option auto option for some format ..how will i proceed .
I have alreadu added the format in galaxy ., which works without auto
option.
Regards
shashi
Are you asking how to make Galaxy
