Re: [galaxy-dev] Managing large database lists in tool wrappers?

2014-04-01 Thread Peter Cock
On 31.03.2014 22:58, Smithies, Russell: Does anyone have a workable solution to managing and displaying large lists in tool wrappers? eg. a database list containing hundreds of enteries in the blast+ tool? (we have 1,056 different blast databases). On Mon, Mar 31, 2014 at 10:18 PM, Björn

[galaxy-dev] restarting multiple web workers

2014-04-01 Thread Langhorst, Brad
Hi, I’m using the multiple web server stuff described here: https://wiki.galaxyproject.org/Admin/Config/Performance/Scaling that seems to address the responsiveness issues i see when many users are active. However, when i add a new tool - it does not alway show up (only for one of the workers

Re: [galaxy-dev] restarting multiple web workers

2014-04-01 Thread Dannon Baker
On Tue, Apr 1, 2014 at 2:48 PM, Langhorst, Brad langho...@neb.com wrote: However, when i add a new tool - it does not alway show up (only for one of the workers maybe?) I don't have good answers for the rest of your questions (I'm sure someone else can chime in), but I do have some information

Re: [galaxy-dev] Managing large database lists in tool wrappers?

2014-04-01 Thread Björn Grüning
Hi, On 31.03.2014 22:58, Smithies, Russell: Does anyone have a workable solution to managing and displaying large lists in tool wrappers? eg. a database list containing hundreds of enteries in the blast+ tool? (we have 1,056 different blast databases). On Mon, Mar 31, 2014 at 10:18 PM,

Re: [galaxy-dev] Bowtie2 and tophat2 data library set up

2014-04-01 Thread Martin Čech
Hi Huayan, these tools should mostly be available from the Tool Shed (Galaxy's appstore). You can install them easily into any Galaxy that you are an admin of. Please see more information here: https://wiki.galaxyproject.org/Admin/Tools Martin, galaxy team On Thu, Mar 20, 2014 at 1:57 AM,