[galaxy-dev] collapse FASTA

2012-09-27 Thread Deepthi Theresa
. -- Deepthi Theresa Thomas Kannanayakal 1919 University Drive NW, Apt. No. E104 T2N 4K7 Calgary, Alberta Canada Ph: (403) 483 7409, (403) 618 5956 Email: deepthither...@gmail.com

[galaxy-dev] fetch sequences

2012-09-05 Thread Deepthi Theresa
Hi all, I want to fetch sequences from a file(in interval format) using custom genome build(using built-in index). How can I do that? I tried fetch sequences in the menu. But I could not find option for a custom genome. Thanks, Deeps

Re: [galaxy-dev] New Tool - Can provide a template file to user

2012-04-26 Thread Deepthi Theresa
., in the Galaxy baseā€”see tabular.py and interval.py Best, J. -- Deepthi Theresa Thomas Kannanayakal 1919 University Drive NW, Apt. No. E104 T2N 4K7 Calgary, Alberta Canada Ph: (403) 483

Re: [galaxy-dev] One tool ,multiple set of outputs

2012-04-25 Thread Deepthi Theresa
. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Deepthi Theresa Thomas Kannanayakal 1919 University Drive NW

Re: [galaxy-dev] Adding New filetype

2012-04-25 Thread Deepthi Theresa
the interface at: http://lists.bx.psu.edu/ -- Deepthi Theresa Thomas Kannanayakal 1919 University Drive NW, Apt. No. E104 T2N 4K7 Calgary, Alberta Canada Ph: (403) 483 7409, (403

Re: [galaxy-dev] dynamic_options

2012-04-24 Thread Deepthi Theresa
to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Deepthi Theresa Thomas Kannanayakal 1919 University Drive NW, Apt. No. E104 T2N 4K7 Calgary