Dear All,
We have had a working local galaxy instance being used with mySQL for almost
two years with a lot of new scripts, workflows built-in and datasets still
associated with it.
We now would like to move to a new server but rather than start from scratch,
would like to move all parts of current instance as is first.
We ran deploy_galaxy.sh of galaxy-admin-utils-master, modifying "hg clone to
point to our current instance".
As it copied the virtual environment details also, I expected to be able to run
start_galaxy.sh without requiring new eggs to be compiled.
Where did I go wrong. Is it always required to re-compile them? Or is there a
way to copy the missing eggs.
Please advise.
Error last few lines:
Traceback (most recent call last):
File "./scripts/fetch_eggs.py", line 37, in <module>
c.resolve() # Only fetch eggs required by the config
File "/home/ocimum/GalaxyMigrated/galaxy-dist/lib/galaxy/eggs/__init__.py",
line 345, in resolve
egg.resolve()
File "/home/ocimum/GalaxyMigrated/galaxy-dist/lib/galaxy/eggs/__init__.py",
line 195, in resolve
return self.version_conflict( e.args[0], e.args[1] )
File "/home/ocimum/GalaxyMigrated/galaxy-dist/lib/galaxy/eggs/__init__.py",
line 226, in version_conflict
r = pkg_resources.working_set.resolve( ( dist.as_requirement(), ), env,
egg.fetch )
File
"/home/ocimum/GalaxyMigrated/galaxy_venv/local/lib/python2.7/site-packages/distribute-0.6.24-py2.7.egg/pkg_resources.py",
line 584, in resolve
raise DistributionNotFound(req)
pkg_resources.DistributionNotFound: numpy==1.6.0
Fetch failed.
Regards,
Madhuri
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