So we did the following:
Downloaded the data
Added the paths to .loc file
restarted galaxy
We still are getting the following error:
2: Extract Genomic DNA on data 1
empty
format: fasta, database: hg19
56 warnings, 1st is: Chromosome by name 'chr22' was not found for build
'hg19'.
Hi Ricardo,
This tool requires external data that you'll need to configure. Here's how:
(1) download the 2bit file from UCSC for your genomes into a local directory
from here: http://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/
(2) add an entry like this to alignseq.loc (note that you'll
