Re: [galaxy-dev] BWA Problem

2012-05-29 Thread Geert Vandeweyer
Hi, Have you created the index files using the exact same version of bwa? I've had segfaults when using references indexed on a different computer running a different version. Geert On 05/28/2012 08:54 PM, CHEBBI Mohamed Amine wrote: Hi ! I have a problem when i execute BWA from my local

[galaxy-dev] BWA Problem

2012-05-28 Thread CHEBBI Mohamed Amine
Hi ! I have a problem when i execute BWA from my local galaxy instance. I have this error message : An error occurred running this job:*BWA Version: 0.6.1-r104 Error indexing reference sequence. [bwa_index] Pack FASTA... 2.35 sec [bwa_index] Construct BWT for the packed sequence... Segmentation