Re: [galaxy-dev] BWA installation

Hi, מירב Sounds like you might want to try reindexing and make sure you have plenty of disk space - I have a .rbwt file from the last time I indexed using BWA version: 0.6.2-r126 and it works fine for me. On Sun, Jun 2, 2013 at 4:02 PM, מירב . wrote: > Thanks fo your answer, But when I am tri

Re: [galaxy-dev] BWA installation

Thanks fo your answer, But when I am tring to use the bwa and to do "Map with BWA for Illumina " I'm getting this error: The alignment failed. Error aligning sequence. [bwa_aln] 17bp r

Re: [galaxy-dev] BWA installation

Hello, מירב It looks like the indexing system/format in 'bwa index' has changed and we haven't updated the wiki to reflect the changes. The reverse index (which includes the .r* files) are now part of the forward index. You should be fine to proceed. I'll update the wiki to reflect this. >From

[galaxy-dev] BWA installation

Hello all, I am trying to install BWA , I used the command: " bwa index -a bwtsw /global_data/hg18full.fa " and I got only 5 files insted of 8 The missing files are - rbwt - rpac - .rsa I didn't recieve any error message while running. thanks for your help merav