Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ?

2013-08-08 Thread Ravpreet Setia
: [galaxy-dev] Cloudman - When will the symlinks be resolved ? The new volume update hasn't been released yet to fix those tool issues, but the existing volume should actually appear in /mnt at launch. On Thu, Aug 1, 2013 at 4:28 PM, Ravpreet Setia ravpreet.se...@oicr.on.camailto:ravpreet.se

Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ?

2013-08-08 Thread Ravpreet Setia
: Thursday, August 08, 2013 4:39 PM To: Dannon Baker Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ? I tried this method again and it still does not work. The only items in /mnt are the directories cm and lost+found

Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ?

2013-08-01 Thread Ravpreet Setia
To: Ravpreet Setia Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ? We're working on it but don't have a specific ETA for the release of the new volume. For now, you can continue to create and run non-migrated clusters using the previous version

Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ?

2013-08-01 Thread Ravpreet Setia
] on behalf of Ravpreet Setia [ravpreet.se...@oicr.on.ca] Sent: Thursday, August 01, 2013 4:11 PM To: Dannon Baker Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ? Here it is: 'pd.yaml' not found at paths.py load! Set paths.P_GALAXY_HOME

Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ?

2013-08-01 Thread Dannon Baker
:* Thursday, August 01, 2013 4:11 PM *To:* Dannon Baker *Cc:* galaxy-dev@lists.bx.psu.edu *Subject:* Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ? Here it is: 'pd.yaml' not found at paths.py load! Set paths.P_GALAXY_HOME as '/mnt/galaxyTools/galaxy-central' Python

[galaxy-dev] Cloudman - When will the symlinks be resolved ?

2013-07-29 Thread Ravpreet Setia
I am referring to the following bug: https://bitbucket.org/galaxy/cloudman/issue/6/tool-default-symbolic-links-to-mnt We are waiting for this bug to resolve before we fix any other issues with our Cloudman scripts. I am wondering when you think this bug will be resolved so I can plan my time.

Re: [galaxy-dev] Cloudman - When will the symlinks be resolved ?

2013-07-29 Thread Dannon Baker
We're working on it but don't have a specific ETA for the release of the new volume. For now, you can continue to create and run non-migrated clusters using the previous version of Cloudman using this launch form: https://main.g2.bx.psu.edu/cloudlaunch?ami=ami-da58aab3bucket_default=gxy-workshop