---------- Forwarded message ---------- From: Chebbi Mohamed Amine <chebbimam...@gmail.com> Date: 2012/7/18 Subject: Re: [galaxy-dev] Galaxy crach while visualization To: Jeremy Goecks <jeremy.goe...@emory.edu>
Hello Jeremy! Thanks for your response. Yes the paster.log is not complaining. Excuse me where I can found the javascript log. In /var/log I haven't any file related to javascript.log. Thanks Amine 2012/7/17 Jeremy Goecks <jeremy.goe...@emory.edu> > Hello Amine, > > The paster log looks normal, and Postgre log is standard given the crash. > Was there anything out of the ordinary that you can spot in the paster log > and/or Javascript log in your Web browser? > > Thanks, > J. > > On Jul 17, 2012, at 6:53 AM, Chebbi Mohamed Amine wrote: > > Hello Galaxy team ! > > I have e strange problem whith my Galaxy trackster visualization . While > viewing bookmarked regions in my visualisation the whole > Galaxy process crashed and needed to be restarted, mainly when I use > Chrome browser. > > Above the Paster.log : > > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:36 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=1183972&high=1185154&mode=Auto&resolution=2.954022988505747&dataset_id=f4b17be90d9b3c9d&hda_ldda=hda&filter_cols=%5B%22Score%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.11 (KHTML, > like Gecko) Chrome/20.0.1132.47 Safari/536.11" > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:36 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=1182790&high=1183972&mode=Auto&resolution=2.954022988505747&dataset_id=ec90add676cb0cce&hda_ldda=hda&filter_cols=%5B%22Mapping+Quality%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.11 (KHTML, > like Gecko) Chrome/20.0.1132.47 Safari/536.11" > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:36 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=1181609&high=1182791&mode=Auto&resolution=2.954022988505747&dataset_id=ec90add676cb0cce&hda_ldda=hda&filter_cols=%5B%22Mapping+Quality%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.11 (KHTML, > like Gecko) Chrome/20.0.1132.47 Safari/536.11" > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:36 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=1183972&high=1185154&mode=Auto&resolution=2.954022988505747&dataset_id=ec90add676cb0cce&hda_ldda=hda&filter_cols=%5B%22Mapping+Quality%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.11 (KHTML, > like Gecko) Chrome/20.0.1132.47 Safari/536.11" > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:36 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=1180427&high=1181609&mode=Auto&resolution=2.954022988505747&dataset_id=cc26e7b927e75a3d&hda_ldda=hda&filter_cols=%5B%22Score%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.11 (KHTML, > like Gecko) Chrome/20.0.1132.47 Safari/536.11" > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:36 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=1181609&high=1182791&mode=Auto&resolution=2.954022988505747&dataset_id=cc26e7b927e75a3d&hda_ldda=hda&filter_cols=%5B%22Score%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) > AppleWebKit/536.11 (KHTML, like Gecko) Chrome/20.0.1132.47 Safari/536.11" > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:36 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=1182790&high=1183972&mode=Auto&resolution=2.954022988505747&dataset_id=cc26e7b927e75a3d&hda_ldda=hda&filter_cols=%5B%22Score%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.11 (KHTML, > like Gecko) Chrome/20.0.1132.47 Safari/536.11" > xxx.xxx.xx.xxx, xxx.xx.xx.x - - [12/Jul/2012:12:56:37 +0200] "GET > /galaxy/tracks/data?chrom=chr19&low=814128&high=815310&mode=Auto&resolution=2.954022988505747&dataset_id=7710e7c5028b7c3b&hda_ldda=hda&filter_cols=%5B%22Score%22%5D > HTTP/1.1" 200 - " > http://xxx.xxx.com/galaxy/u/amine/v/rna-seq-analysis-tophats-output"; > "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.11 (KHTML, > like Gecko) Chrome/20.0.1132.47 Safari/536.11" > > PostgreSQL saw the crach : > > 2012-07-12 12:56:40 CEST LOG: could not receive data from client: > Connection reset by peer > 2012-07-12 12:56:40 CEST LOG: unexpected EOF on client connection > 2012-07-12 12:56:40 CEST LOG: unexpected EOF on client connection > 2012-07-12 12:56:40 CEST LOG: disconnection: session time: 0:00:46.907 > user=user database=database host=server port=33106 > 2012-07-12 12:56:40 CEST LOG: unexpected EOF on client connection > 2012-07-12 12:56:40 CEST LOG: unexpected EOF on client connection > 2012-07-12 12:56:40 CEST LOG: unexpected EOF on client connection > 2012-07-12 12:56:40 CEST LOG: disconnection: session time: 0:03:45.206 > user=user database=database host=server port=42867 > 2012-07-12 12:56:40 CEST LOG: disconnection: session time: 0:06:43.257 > user=user database=database host=server port=56383 > 2012-07-12 12:56:40 CEST LOG: disconnection: session time: 0:04:22.120 > user=user database=database host=server port=42663 > 2012-07-12 12:56:40 CEST LOG: disconnection: session time: 0:04:22.596 > user=user database=database host=server port=42656 > > > Thanks > Amine > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. 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