Re: [galaxy-dev] How to add the option "-c enabled" to the qsub command?

2012-11-05 Thread Luobin Yang
Thanks for the link, Scott, I've confirmed that setting the job runner as pbs://machine.name/queue.name/-l nodes=n:ppn=m -c enabled/ in universe_wsgi does not work. Luobin On Mon, Nov 5, 2012 at 10:30 AM, Scott McManus wrote: > I recommend checking out John Chilton's dynamic job runner first: >

Re: [galaxy-dev] How to add the option "-c enabled" to the qsub command?

2012-11-05 Thread Scott McManus
I recommend checking out John Chilton's dynamic job runner first: http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-June/010080.html -Scott - Original Message - > Hi, guys, > I would like to enable checkpoint and restart for some galaxy jobs. > In order to do that, I need to add "-c

[galaxy-dev] How to add the option "-c enabled" to the qsub command?

2012-11-05 Thread Luobin Yang
Hi, guys, I would like to enable checkpoint and restart for some galaxy jobs. In order to do that, I need to add "-c enabled" option when using "qsub" to submit a job. What files should I change to add this option? I am using Torque PBS job runner. Thanks, Luobin _