Re: [galaxy-dev] Impossible to add a (new) tool in a workflow (in edition mode)

2012-12-11 Thread Sarah Maman
Dannon, Here is myjavascript console errors : SyntaxError: missing ) after argument list : /* ool( 'sm_miRNA_join_annot', '* Construction de la matrice d'annotations' ) */ /*editor...8829fc# (ligne 1, col. 60)*/ I replaced this syntax "Construction de la matrice d'annotations" by the latter

Re: [galaxy-dev] Impossible to add a (new) tool in a workflow (in edition mode)

2012-12-11 Thread Dannon Baker
The paster.log is just the file for the output you've copied below when running daemonized -- if you're running in the foreground it just gets sent there instead of to the file. So, no obvious errors there. Could you check for javascript console errors? And, if you'd like, feel free to send t

Re: [galaxy-dev] Impossible to add a (new) tool in a workflow (in edition mode)

2012-12-11 Thread Sarah Maman
Thanks Danon, But I have no error generated in my error log file (logs of run.sh): [11/Dec/2012:16:39:09 +0200] "GET /galaxy/workflow HTTP/1.1" 200 - "http://URL/galaxy/root"; "Mozilla/5.0 (Windows NT 6.1; WOW64; rv:17.0) Gecko/20100101 Firefox/17.0" IP - - [11/Dec/2012:16:39:11 +0200] "GET /

Re: [galaxy-dev] Impossible to add a (new) tool in a workflow (in edition mode)

2012-12-11 Thread Dannon Baker
Do you see any errors in Galaxy's paster.log, or in the javascript console? -Dannon On Dec 11, 2012, at 8:40 AM, Sarah Maman wrote: > Hello, > > For one of my tools that I have added to my local instance of Galaxy, I can > not add this tool in the editing workflow. When I click on the tool na

[galaxy-dev] Impossible to add a (new) tool in a workflow (in edition mode)

2012-12-11 Thread Sarah Maman
Hello, For one of my tools that I have added to my local instance of Galaxy, I can not add this tool in the editing workflow. When I click on the tool name in the "tools" windows on the left, it does not appear in the editing workflow. Do you have any idea? Thank you in advance, Sarah Maman