Re: [galaxy-dev] Non-admin tool install/import

2014-06-10 Thread Ross
On Tue, Jun 10, 2014 at 7:37 AM, Karthik Gururaj gururaj.kart...@gmail.com wrote: Thanks - will take a look at the Tool Shed and see if there is anything there we can use in safe manner. Else, the old fashioned way of asking users to test out on their tools on a standalone Galaxy system and

Re: [galaxy-dev] Non-admin tool install/import

2014-06-10 Thread Karthik Gururaj
Sorry, I meant Tool Factory when I wrote Tool Shed in my previous email. On Tue, Jun 10, 2014 at 5:25 PM, Ross ross.laza...@gmail.com wrote: On Tue, Jun 10, 2014 at 7:37 AM, Karthik Gururaj gururaj.kart...@gmail.com wrote: Thanks - will take a look at the Tool Shed and see if there is

Re: [galaxy-dev] Non-admin tool install/import

2014-06-08 Thread John Chilton
Galaxy doesn't really support this use case and it will be major effort to get it work this way I suspect. Pieces to look at include: The Galaxy Tool Factory (it has the ability to create reusable tools from scripts): http://www.ncbi.nlm.nih.gov/pubmed/23024011 You may be able to modify it in

[galaxy-dev] Non-admin tool install/import

2014-06-07 Thread Karthik Gururaj
Hello, We have a centralized Galaxy installation for out cluster which can be used by many users (backend interfaces with HTCondor to run jobs). Is there any way for non-administrator users to import/install their own tools so that they may use it in their workflows (under a subsection called