Re: [galaxy-dev] Proposed cd-hit tool dependency change in galaxy

2014-06-25 Thread Björn Grüning
Hi Qi, thank you very much for you contribution. I will try to get your patch to the correct person during the upcoming Galaxy Conference. Cheers, Bjoern Am 13.06.2014 17:29, schrieb Qi, Chuyang: Hi all, When installing and testing the cd-hit tool from jjohnson from the main galaxy

[galaxy-dev] Proposed cd-hit tool dependency change in galaxy

2014-06-13 Thread Qi, Chuyang
Hi all, When installing and testing the cd-hit tool from jjohnson from the main galaxy toolshed into my local instance of galaxy, I encountered a problem where galaxy cannot find the cd-hit program. The error was: /bin/sh: 1: cd-hit-est: not found As I debugged the problem, I found that