Re: [galaxy-dev] Remove libraries using Galaxy code or API
On May 1, 2012, at 4:32 AM, liram_va...@agilent.com wrote: Hi Nate, Great! Thanks. Any chance that this change will be also included on galaxy-dist soon? Our next dist was supposed to be out already but it was stalled to fix a few bugs. It'll most likely be in the next one, whenever that is. --nate Thanks, Liram -Original Message- From: Nate Coraor [mailto:n...@bx.psu.edu] Sent: Monday, April 30, 2012 11:29 PM To: VARDI,LIRAM (A-Labs,ex1) Cc: galaxy-...@bx.psu.edu; BEN-DOR,AMIR (A-Labs,ex1) Subject: Re: [galaxy-dev] Remove libraries using Galaxy code or API On Apr 23, 2012, at 4:55 AM, liram_va...@agilent.com liram_va...@agilent.com wrote: Hello, I am using Galaxy API for some actions and I must say that this is indeed a really great feature with a great power. Anyway, I am trying to write a python script that one of its goals is to remove some data libraries, But until now, I was unable to find a way to remove data library or some of its datasets using the API or by direct call to Galaxy's code. I found a old post that claim that this feature is not yet implemented. My questions: 1) Is this has changed since? I mean, is there a way now to clean or remove completely a data library? 2) Is there a way to use Galaxy code to remove a library? Such as a function that can be used in my script to remove this library? Hi Liram, I've just implemented library deletion in changeset 1640cbaafd09. --nate Thanks in advance! Liram ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Remove libraries using Galaxy code or API
Hi Nate, Great! Thanks. Any chance that this change will be also included on galaxy-dist soon? Thanks, Liram -Original Message- From: Nate Coraor [mailto:n...@bx.psu.edu] Sent: Monday, April 30, 2012 11:29 PM To: VARDI,LIRAM (A-Labs,ex1) Cc: galaxy-...@bx.psu.edu; BEN-DOR,AMIR (A-Labs,ex1) Subject: Re: [galaxy-dev] Remove libraries using Galaxy code or API On Apr 23, 2012, at 4:55 AM, liram_va...@agilent.com liram_va...@agilent.com wrote: Hello, I am using Galaxy API for some actions and I must say that this is indeed a really great feature with a great power. Anyway, I am trying to write a python script that one of its goals is to remove some data libraries, But until now, I was unable to find a way to remove data library or some of its datasets using the API or by direct call to Galaxy's code. I found a old post that claim that this feature is not yet implemented. My questions: 1) Is this has changed since? I mean, is there a way now to clean or remove completely a data library? 2) Is there a way to use Galaxy code to remove a library? Such as a function that can be used in my script to remove this library? Hi Liram, I've just implemented library deletion in changeset 1640cbaafd09. --nate Thanks in advance! Liram ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Remove libraries using Galaxy code or API
On Apr 23, 2012, at 4:55 AM, liram_va...@agilent.com liram_va...@agilent.com wrote: Hello, I am using Galaxy API for some actions and I must say that this is indeed a really great feature with a great power. Anyway, I am trying to write a python script that one of its goals is to remove some data libraries, But until now, I was unable to find a way to remove data library or some of its datasets using the API or by direct call to Galaxy’s code. I found a old post that claim that this feature is not yet implemented. My questions: 1) Is this has changed since? I mean, is there a way now to clean or remove completely a data library? 2) Is there a way to use Galaxy code to remove a library? Such as a function that can be used in my script to remove this library? Hi Liram, I've just implemented library deletion in changeset 1640cbaafd09. --nate Thanks in advance! Liram ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
[galaxy-dev] Remove libraries using Galaxy code or API
Hello, I am using Galaxy API for some actions and I must say that this is indeed a really great feature with a great power. Anyway, I am trying to write a python script that one of its goals is to remove some data libraries, But until now, I was unable to find a way to remove data library or some of its datasets using the API or by direct call to Galaxy's code. I found a old post that claim that this feature is not yet implemented. My questions: 1) Is this has changed since? I mean, is there a way now to clean or remove completely a data library? 2) Is there a way to use Galaxy code to remove a library? Such as a function that can be used in my script to remove this library? Thanks in advance! Liram ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
