Hello,
My problem is solved. Here is a solution :
my $output_galaxy = $ARGV[2];
.
if (! -e $output_perl_file) {print STDERR no output file\n;}
else {`(cp -a $output_perl_file $output_galaxy) ./error.log 21`}
And an
Hello,
I have added a tool in my local instance to map BAM files on reference
genome fasta file thanks to BWA.
This tool runs, and the output file generated in database/files/000 is
correct (not empty and good data inside) but the output listed in the
history panel of Galaxy interface , is
