, October 13, 2011 11:19 PM
To: Joseph Hargitai
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] moving the galaxy-dist folder structure
Hi, Joe - not sure this will help but here goes: As you know, most
tools expect to find normal executables (like bwa and samtools) on the
execution host
Hi,
we moved the /home/galaxy/galaxy-dist structure to another fs. Some tools, like
fastqc, stopped working. Are there internal links that we possibly ignored?
Is there a way to adjust the installation via a download or update?
joe
___
Hi, Joe - not sure this will help but here goes: As you know, most
tools expect to find normal executables (like bwa and samtools) on the
execution host path but java packages like FastQC are a special case.
Java based tool wrappers like the Picard tools expect to find the
Picard jar files in
