Hi Jeremy,
Thank you so much for reply.
You are right…..I just took the first few lines in fastq file and mapped with
bowtie. Now it works with this small dataset.
I am trying to find the error in my complete dataset, but haven't spotted any
yet.
Do you think the error is from reading the
When visualizing a BAM dataset, Galaxy generates a bigwig dataset of read
coverage. Trying to visualize this dataset is causing the issue. You could try
to convert the BAM to BigWig manually (click on dataset's pencil icon --
convert format -- convert to bigwig) and see if there are any issues