Maxim,
Brad is correct - to supply a reference annotation file to Cufflinks,
the file must in the active history at the time the tool is executed.
Then when setting the options for "Use Reference Annotation:" on the
tool form, the pull-down will select from datasets in the right history
panel
Hi Maxim:
I think you have to load your annotations into your history to do this.
I keep ours in the shared data area and have users import and provide it as
input to our workflows.
Brad
On Feb 21, 2013, at 6:53 AM, Maxim
mailto:deeeperso...@googlemail.com>> wrote:
Hi,
I got my local instanc
Hi,
I got my local instance of Galaxy running and most tools work properly.
Unfortunately I seem not to understand how to implement cufflinks within
Galaxy, in particular I do not know how to inform Galaxy about the location
of GTF annotation files.
I searched the archives for this and was not su
