Hello all,
Good news - automated testing on the Galaxy Tool Shed
seems to be mostly working again (after a period of trouble
in the New Year). Thanks Dave B. et al, I'm sure this has
been a lot of effort behind the scenes. I'm looking forward
to getting a clean sweep of passing tests again...
I
Hi John,
Thanks for your reply.
I think for the time being, I will simply create a tool that creates an
interval file, and the parallelize on this interval file.
Though I agree, this would be a useful feature to include but I don't
think I am anywhere near ready to start dabbling in galaxy's
Hi Damion,
I see your blast_reporting tool is now on the Main Tool Shed.
https://toolshed.g2.bx.psu.edu/view/damion/blast_reporting
I am a little confused about your tabular output options:
option value=std selected=TrueStandard 12 columns/option
option value=std+seqsStandard 12 columns +
Hi Björn,
Command line arguments are often case sensitive
(e.g. samtools switches), but are Galaxy parameter
names?
Peter
On Sat, Feb 28, 2015 at 9:11 PM, Björn Grüning
bjoern.gruen...@gmail.com wrote:
Hi all,
we are planning to work on a project to implement a Galaxy fuse based
shell.
Hello,
I am playing with Galaxy splitters capabilities. After some cases that
you help me out to solve I am facing a new issue, this is maybe due to my
tool configuration file, but in any case I tell you what I've done.
What I would like to do exactly, is to split paired fastq, map them and
then
