Thanks Guys,
Help greatly appreciated.
I need this as my team are thinking of using
SCDE see http://pklab.med.harvard.edu/scde/index.html
which uses cairo.
Monday in a bank holiday here so even if you guys are super fast I will not be
able to test until Tuesday.
Christian
University of
Hi,
I have CCed Dave here. He took over the maintenance of R many moons ago.
Dave can it be that we need to include some cairo headers, shared
objects into the tarball from docker-build?
Thanks,
Bjoern
On 28.08.2015 16:16, Christian Brenninkmeijer wrote:
Thank you Björn for the link to the
I did a
find ~ -name cairo.h
and it looks like the header files are being made
/home/christian/galaxy_test/dependency_dir/cairo/1.12.14/iuc/package_cairo_1_12_14/5c25a57405a9/include/cairo/cairo.h
and
Hi,
can you put
/home/christian/galaxy/dependency_dir/R/3.1.2/brenninc/package_r_3_1_2/655087f549e9/include/
into your LD_LIBRARY_PATH and test if this helps?
Am 28.08.2015 um 17:12 schrieb Christian Brenninkmeijer:
I did a
find ~ -name cairo.h
and it looks like the header files are being
Each python ORM object for a dataset has both create_time and update_time.
If I understand correctly and there's one job that's producing the bam
files and json file you can use 'hda.creating_job.output_datasets' (in
python and where 'hda' is the ORM object for the json file) to get all the
Hi Carl,
Finally got it to work with hda.creating_job.output_datasets!!!
Thank you so much for your help :)
Sincerely,
-Asma
On Fri, Aug 28, 2015 at 2:38 PM, Carl Eberhard carlfeberh...@gmail.com
wrote:
Each python ORM object for a dataset has both create_time and update_time.
If I
Hi again;
I can execute Docker tools from Galaxy (thanks!), however now I have a
further problem that must be Galaxy-related and I can't debug straight
away. My Galaxy tool is a simple java jar that gets a service URL and an
RDF file as inputs [1], invokes the service by POSTing the RDF to the
