Hi David,
I'm afraid I can't help you with this tool, but there is a metaphlan2
wrapper on the toolshed
that is developed and tested by the iuc (intergalactic utility commission,
https://galaxyproject.org/iuc/), you could give this a try.
I'm pretty sure this tool is functional.
In general galaxy
Thanks for that tip. I did restart galaxy and that problem went away, but..
bowtie2 is on the system path, but I am getting an error about bowtie2 not
being found, even though the path is given to the program in the call (see
below). Is this some weird config problem? Maybe try a different
