[galaxy-dev] Creating cluster_files_directory (default database/pbs)

On Mon, Jan 25, 2016 at 11:33 AM, Peter Cock wrote: > Hello all, > > We're currently looking at changing our Galaxy setup to link user accounts > with Linux user accounts for better cluster integration (running jobs as the > actual user on SGE). As part of this, we've

Re: [galaxy-dev] Creating cluster_files_directory (default database/pbs)

Peter - Nate and I are in agreement that the goal is to eliminate that directory, so I don't want to put effort into automating its creation. https://github.com/galaxyproject/galaxy/issues/1576 If you wish to open a PR that does this though, I would be happy to merge this. The best place to

Re: [galaxy-dev] Creating cluster_files_directory (default database/pbs)

Thanks John, The long term vision you outline makes a lot of sense; I've just added a note to the wiki to try to help anyone else running into this: https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster?action=diff=51=52 Peter On Mon, Jan 25, 2016 at 5:27 PM, John Chilton