Re: [galaxy-dev] Image in tool XML "help" section only renders when installed from toolshed?

2017-08-10 Thread John Chilton
There is an open issue for these paths not working with vanilla Galaxy tools https://github.com/galaxyproject/galaxy/issues/1676. -John On Wed, Aug 9, 2017 at 10:03 AM, Peter Cock wrote: > I'm puzzled now too, cross reference > >

Re: [galaxy-dev] Image in tool XML "help" section only renders when installed from toolshed?

2017-08-09 Thread Peter Cock
I'm puzzled now too, cross reference https://github.com/galaxy-iuc/standards/pull/46 and the original: https://github.com/galaxy-iuc/standards/issues/12 Peter On Wed, Aug 9, 2017 at 3:01 PM, Peter Briggs wrote: > Hello Peter > > Thanks for the fast response.

Re: [galaxy-dev] Image in tool XML "help" section only renders when installed from toolshed?

2017-08-09 Thread Peter Briggs
Hello Peter Thanks for the fast response. From reading around elsewhere I'd understood that using $PATH_TO_IMAGES was now deprecated? I think I tried it anyway and it didn't seem to help. But I might have missed something, so I'd be interested to know if it works for you. Best wishes Peter

Re: [galaxy-dev] Image in tool XML "help" section only renders when installed from toolshed?

2017-08-09 Thread Peter Cock
It looks like something important is not showing in the best practise website, special variable $PATH_TO_IMAGES as per the linked example: .. image:: $PATH_TO_IMAGES/slop-glyph.png Let me look into this, Peter On Wed, Aug 9, 2017 at 2:52 PM, Peter Briggs wrote:

[galaxy-dev] Image in tool XML "help" section only renders when installed from toolshed?

2017-08-09 Thread Peter Briggs
Dear devs I've been updating the section for a locally developed tool and want to include some images, but I've had some issues trying to see them when testing locally. I've followed the instructions outlined here: