Re: [galaxy-dev] Tool Development DELLY

2015-01-12 Thread Peter Cock
Hi Marco, No problem - I originally copied the metadata access trick from one of the Galaxy dev-team's tool anyway. Maybe we need to add this to the wiki... Peter On Tuesday, January 13, 2015, Marco Albuquerque marcoalbuquerque@gmail.com wrote: Hi Peter, I was unaware of how to access

[galaxy-dev] Tool Development DELLY

2015-01-09 Thread Marco Albuquerque
Hello Galaxy, I'm currently working on adding some tools and am having an issue with DELLY. So, I am under the impression that BAM indexing happens automatically when a BAM is uploaded. However there is no associated dataset_i.dat.bai file in the file location in my local instance of galaxy.