Re: [galaxy-dev] regarding tool dependencies

2017-02-17 Thread Martin Čech
Nir. > > -- > *From:* Martin Čech [mar...@bx.psu.edu] > *Sent:* Thursday, February 09, 2017 6:46 PM > *To:* Nir Shachaf; galaxy-...@bx.psu.edu > *Subject:* Re: [galaxy-dev] regarding tool dependencies > > Hello Nir, > > the tool publishing pr

Re: [galaxy-dev] regarding tool dependencies

2017-02-09 Thread Martin Čech
Hello Nir, the tool publishing process looks like this: tools for Galaxy are contributed by developers like you to the Tool Shed https://toolshed.g2.bx.psu.edu/ which serves as an 'appstore' for Galaxies worldwide. Any Galaxy administrator can then instal the tool. Some tools have dependencies,

[galaxy-dev] regarding tool dependencies

2017-02-09 Thread Nir Shachaf
Dear Galaxy-dev team, As a research scientist in the dept. of Plant Sciences I would like to contribute a tool to the 'Metabolomics' tool-box under Galaxy. The tool is principally written in R, with some dependencies (namely: R>=3.x, and several R packages). Following the documentation in: