Re: [galaxy-dev] How does one run Javascript or HTML as a tool? Part 2

2015-12-14 Thread rbrown1422
Good morning Bjorn, I accidentally sent the email before I finished. Thanks for the response to q1-4. The following questions are part of my request. 5. In data_config_type.xml you only use the record which -- manages internal or external displays or both? 6. I added a class in the

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2015-12-14 Thread Carl Eberhard
Hi, Bob There are a number of ways to visualize data in Galaxy, so let's settle on some terminology first for the three major ways: * *display applications*: these are definitions of external websites that can fetch galaxy datasets and display them in their visualization applications. Examples

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2015-12-14 Thread rbrown1422
Thank you Carl for the excellent write-up. It could serve as a visualization plugin tutorial. However, I am still not able to get the visualization icon to appear, see the attachment 2. I feel if I get the icon to show it will all come together. A couple questions followed by file dumps and