[galaxy-dev] Shiny in Galaxy

2017-05-26 Thread Mohamed Kassam
Dear all, I have a shiny application working in my RStudio, but I would like to integrate it to Galaxy that the users can call my application via Galaxy . Thanks in Advance, Mohamed ___ Please keep all replies on the list by using "reply

Re: [galaxy-dev] Shiny in Galaxy

2017-05-26 Thread Md. Rezaul Karim
+1 On May 26, 2017 2:44 PM, "Mohamed Kassam" wrote: > Dear all, > > I have a shiny application working in my RStudio, but I would like to > integrate it to Galaxy that the users can call my application via Galaxy . > > Thanks in Advance, > > Mohamed > >

[galaxy-dev] bwa_mem and "-t" option

2017-05-26 Thread David Kovalic
Hi, Is it possible, and if so how, to run the galaxy devteam (version546ada4a9f43) of bwa_mem with the "-t" option and a value >1? "-t INT number of threads [1]" This would be quite useful, and used, for accelerating single bwa mem jobs. Thanks,

Re: [galaxy-dev] Shiny in Galaxy

2017-05-26 Thread Yvan Le Bras
Dear Mohamed, Karim, galaxy-dev list, A rapid e-mail to inform you that we plan to work on this task in the upcoming weeks with Thimothée and Valentin, copied. We have had some exchanges with Eric (Rasche) and Björn (Grüning) and it seems that using the Galaxy "interactive environment"