Re: [galaxy-dev] Galaxy Tools and Collections Remote Hackathon (Thursday and Friday)

2015-09-17 Thread Björn Grüning
Hello everyone! Today and tomorrow we will try to improve Galaxy tools to consume and create collections. You are welcome to join and contribute in any way. For example code contributions, not matter how small, but also in improving documentations and our [best-practice

Re: [galaxy-dev] need help badly

2015-09-17 Thread Fernandez Edgar
Hello Josh, Thank you so much for the answer. I thought of that but it doesn’t solve my problem. I need to create a routine that looks inside the new job’s directory : So for example, a process that runs every second and looks inside /home/galaxy/galaxy-prod/database/job_working_directory/000 And

[galaxy-dev] need help badly

2015-09-17 Thread Fernandez Edgar
Hello gents, I hope everyone is doing ok... I'm in need of your help so badly it's a little bit urgent: So my galaxy wasn't used in a while but the last time everything was working well: 1. The web-site was functional 2. The local handler upload the files locally on the master 3.

Re: [galaxy-dev] need help badly

2015-09-17 Thread Fernandez Edgar
Thank you again for the precisions. On another note, I have a user that when he goes into his History Options --> Saved Histories -->Advanced Search -->status: all, and he views one of his deleted histories, he sees a job with those spinning dots. However, everything is deleted: history,

Re: [galaxy-dev] need help badly

2015-09-17 Thread Josh Woodring
Hi Edgar, Hm, I haven't gotten it to work but galaxy is supposed to support looking in the working directory for the file. Its likely for reasons similar to your error. If you have access to the program's script you could try to force it to write the results somewhere else. I would be surprised