Re: [galaxy-dev] sending data

2016-08-22 Thread Jennifer Hillman-Jackson
Hello, Galaxy accepts data using *passive FTP*. This client will send data that way but also in various secure modes. Please try using passive mode. Thanks! Jen -- Jennifer Hillman-Jackson Galaxy Application Support http://usegalaxy.org http://galaxyproject.org http://biostar.usegalaxy.org

[galaxy-dev] Docker ToolShed Imports Issue

2016-08-22 Thread Yip, Miu ki
Hi all, I’m trying to import shed tools into Galaxy for Docker. When I build the container, I get this error message: TASK [galaxy_tools : Install Tool Shed tools] ** [WARNING]: The loop variable 'item' is already in use. You should set the `loop_var` value in

[galaxy-dev] sending data

2016-08-22 Thread Labdros drosophila
In the last two days I'm dificuldaddes techniques to send my data by BAREFTP , I wanted to know if there is anything wrong by port 21 or the server? Thank you for your attention and sorry for any inconvenience. ___ Please keep all replies on

[galaxy-dev] Issue when using xsendfile with galaxy release_16.07

2016-08-22 Thread SAPET, Frederic
Hello I'm trying the latest Galaxy (git status gives me : # On branch release_16.07) I've set the xsend option in galaxy.ini (in order to run Galaxy behind a web server proxy, and apply all methods described here : https://wiki.galaxyproject.org/Admin/Config/ApacheProxy) apache_xsendfile =

[galaxy-dev] Workflow ID, Galaxy Instance URL, API Key in Galaxy Tool Config

2016-08-22 Thread Katherine Beaulieu
Hi everyone, We are trying to obtain the three things in the tile of this post to enable a tool to use the bioblend api and get the .ga file so that any user can go back into our system, get the workflow associated with the end file, get the input parameters which are tags associated with the end