Hi Matthias,
in addition to the link you posted there is also this here that looks
similar:
http://dev.list.galaxyproject.org/DRMAA-options-for-SGE-td4140931.html
Perhaps qsub is filling in a default queue, and drmaa is not doing that?
You could try adding a queue to the nativeSpecification.
Dear list,
I'm struggling to get jobs running on our cluster (UGE).
In the galaxy log I see:
galaxy.jobs.runners.drmaa DEBUG 2017-04-13 12:24:57,799 (10) submitting
file
/gpfs1/data/galaxy_server/galaxy-dev/database/jobs_directory/000/10/galaxy_10.sh
galaxy.jobs.runners.drmaa DEBUG
