[galaxy-dev] Data manager for ncbi_blast_plus in the main tool shed?

2017-08-15 Thread David Kovalic
Peter, Thanks. Dan, What is your opinion (what work needs to be done to make this production-worthy)? Maybe if my chops are up to it I can take a crack… David David Kovalic Ph.D.President,Analomephone:+314.496.8808web:www.analome.comemail: kova...@analome.com On Fri, Aug 11, 2017 4:58 AM,

Re: [galaxy-dev] Data manager for ncbi_blast_plus in the main tool shed?

2017-08-11 Thread Peter Cock
Hi David, Daniel Blankenberg wrote one (CC'd): https://github.com/peterjc/galaxy_blast/tree/master/data_managers/ncbi_blastdb http://testtoolshed.g2.bx.psu.edu/view/blankenberg/data_manager_example_blastdb_ncbi_update_blastdb I've never used it in production and don't have enough understanding

[galaxy-dev] Data manager for ncbi_blast_plus in the main tool shed?

2017-08-10 Thread David Kovalic
Hi, Does anyone know if a data manager exists in the tool shed for creating and integrating NCBI BLAST+ indices within galaxy? I can't seem to find it in the tools shed or searching the internet Surly such a tool must exist. Any info would be greatly appreciated. Thanks, David David Kovalic