Re: [galaxy-dev] EMBOSS 6.6.0 + NCBI-BLAST+ integration

2016-02-09 Thread Floreline TOUCHARD
Hi, sorry for the late response ! I tested the modifications proposed in the "Allow to select multiple database" pull request and it works !!! Thanks a lot ! Floreline. P.S : I'm not familiar with all github functionnalities yet, but I will work on it ;) 2016-01-20 16:07 GMT+01:00 Peter Cock

Re: [galaxy-dev] EMBOSS 6.6.0 + NCBI-BLAST+ integration

2016-02-09 Thread Peter Cock
Good to know :) https://github.com/peterjc/galaxy_blast/pull/77 The pull request looks good - sadly distracted by TravisCI failures from Galaxy/planemo/dependency changes. Thanks, Peter On Tue, Feb 9, 2016 at 3:28 PM, Floreline TOUCHARD wrote: > Hi, > > sorry

Re: [galaxy-dev] EMBOSS 6.6.0 + NCBI-BLAST+ integration

2016-01-20 Thread Peter Cock
On Wed, Jan 20, 2016 at 2:43 PM, Gildas Le Corguillé wrote: > Hi, > > A long time ago, in a far far svn repo, we did this "multiple=true" on Peter > wrappers. > > I will try to propose it quickly :) > > Gildas Great - a pull request against

Re: [galaxy-dev] EMBOSS 6.6.0 + NCBI-BLAST+ integration

2016-01-20 Thread Peter Cock
On Wed, Jan 20, 2016 at 9:19 AM, Floreline TOUCHARD wrote: > Hi, > > I would like to add some tools of the EMBOSS suite (6.6.0) to my Galaxy > instance. It seems that the only wrapper available for Galaxy is for the > 5.0.0 version >

Re: [galaxy-dev] EMBOSS 6.6.0 + NCBI-BLAST+ integration

2016-01-20 Thread Peter Cock
On Wed, Jan 20, 2016 at 2:22 PM, Floreline TOUCHARD wrote: > Thanks for the answer ! > > I compared the two versions of tools. It does not seem to be any major > differences indeed. I added these tools to my instance successfully. Great :) > Additional options in

Re: [galaxy-dev] EMBOSS 6.6.0 + NCBI-BLAST+ integration

2016-01-20 Thread Gildas Le Corguillé
Hi, A long time ago, in a far far svn repo, we did this "multiple=true" on Peter wrappers. I will try to propose it quickly :) Gildas - Gildas Le Corguillé - Bioinformatician/Bioanalyste Plateforme ABiMS (Analyses and

Re: [galaxy-dev] EMBOSS 6.6.0 + NCBI-BLAST+ integration

2016-01-20 Thread Floreline TOUCHARD
Thanks for the answer ! I compared the two versions of tools. It does not seem to be any major differences indeed. I added these tools to my instance successfully. Additional options in version 6 are not to be integrate to my Galaxy instance immediately. I will update my XML file later if need