Re: [galaxy-dev] New galaxy parameter type

2016-07-15 Thread Martin Čech
Katherine please disregard my answer, I probably misread your question. :) M. On Fri, Jul 15, 2016 at 3:05 PM Peter Cock wrote: > Did you mean parameter as in input field shown > to the user? Like a combobox or text field? > > Since this happened to come up earlier

Re: [galaxy-dev] New galaxy parameter type

2016-07-15 Thread Peter Cock
Did you mean parameter as in input field shown to the user? Like a combobox or text field? Since this happened to come up earlier today, here's a rejected pull request which added a password parameter - that ought to give you a rough idea: https://github.com/galaxyproject/galaxy/pull/393 Peter

Re: [galaxy-dev] New galaxy parameter type

2016-07-15 Thread Martin Čech
Hi Katherine, an example of a datatype addition can be seen in this PR: https://github.com/galaxyproject/galaxy/pull/2452 You need to define a class and teach it to sniff files of your defined type (with a doctest) and how to generate peek for the datatype's datasets in history. Let us know if

[galaxy-dev] New galaxy parameter type

2016-07-15 Thread Katherine Beaulieu
Hi everyone, I am looking to implement a new parameter type for galaxy tool development. Does anyone know what would be involved in doing something like this or perhaps what files would need to be edited? ___ Please keep all replies on the