Hi Marco,
this tool has not been updated recently and it still uses
tool_dependencies.xml for its dependencies. You can choose among 3
options (in order of my personal preference):
- add a new requirement for Python2 to the tool bam_to_bigwig.xml file:
python
and reinstall the Conda
Dear experts,
I've an issue with the bam_to_bigwig (brad-chapman) tool from the ToolShed.
I've installed it using Conda to solve dependencies.
When I run it on a bam file I get this error:
Fatal error: Exit code 1 ()
File "/home/galaxy/shed_tools/
