Just to provide a little more detail on the collection point... Daniel
Blankenberg presented a talk at the Galaxy Community Conference on
metagenomics that talked a lot about "large" collection handling in
Galaxy - https://gcc16.sched.org/event/5Y0M/metagenomics-with-galaxy.
I think his rule of thu
Hi Stephan and Gildas,
I think a tool is a nice addition. Archives can be arbitrary complex and
nested so a tool would make perfect sense.
If this tools is working well and we know which features we need and how
they should be displayed to the user it more easy to move these kind of
functionality
Hi Stephan,
I will only answer about uploading zip files. Since the release_16.04, a zip
datatype is integrated within the Galaxy distribution. But without any sniffer,
so your users will have to select, before the upload, the zip datatype manually.
I also want to write this kind of tool which
colleagues,
in our adaptation of galaxy for large-scale natural language
processing, a fairly common use pattern is to invoke a workflow on a
potentially large number of text files. hence, i am wondering about
facilities for uploading an archive (in ‘.zip’ or ‘.tgz’ format, say)
containing severa
