Re: [galaxy-dev] use or convert tool.xml file for database webpage

2018-02-06 Thread Gildas Le Corguillé
Hi Jochen, Note that there are some projects which propose a layer, a web interface, over the Galaxy engine. Those solutions are using the API (BioBlend) to display Galaxy objects from the history, and to launch jobs. Here is two of them: MetaGenSense:

Re: [galaxy-dev] use or convert tool.xml file for database webpage

2018-02-06 Thread Peter Cock
Hi Jochen, I think you will find this very difficult without including a large chunk of the Galaxy code in your project for turning a tool XML file into an object representation. Although the main features of the tool XML provide a quite neutral tool description (list of arguments, output

[galaxy-dev] use or convert tool.xml file for database webpage

2018-02-06 Thread Jochen Bick
Hi, I have a question regarding the layout of each tool. I would like to use the same layout (same xml file) like inside galaxy to build a standalone webpage for a database. Is it possible to convert or use the xml file outside galaxy? My problem is that I have no idea how the xml file get