[galaxy-dev] unable to purge deleted datasets

2012-05-14 Thread KOH Jia Yu Jayce (GIS)
Hi, We have a problem. While trying to purge datasets, the files remain but in the database the dataset is marked as purged. Can you help? Thanks so much~ ___ Please keep all replies on the list by using reply all in your mail client. To

Re: [galaxy-dev] Problem related to a job that failed

2012-05-14 Thread Kelkar, Hemant
Increasing the 'retry_job_output_collection' value in universe_wsgi.ini fixed the failed job problem. Thanks for the suggestion Nate. --Hemant -Original Message- From: Nate Coraor [mailto:n...@bx.psu.edu] Sent: Friday, May 11, 2012 3:54 PM To: Kelkar, Hemant Cc:

Re: [galaxy-dev] Running Galaxy behind apache2

2012-05-14 Thread Carlos Borroto
On Thu, May 10, 2012 at 4:23 PM, CHEBBI Mohamed Amine chebbimam...@gmail.com wrote: I configured the apache2.conf like above : If you are using Ubuntu or Debian, the place to put this configuration is '/etc/apache2/sites-available/default' not /etc/apache2/apache2.conf. Hope it helps, Carlos

Re: [galaxy-dev] Running Galaxy behind apache2

2012-05-14 Thread CHEBBI Mohamed Amine
Yes Carlos ! it's working now. Muchas Gracias :) 2012/5/14 Carlos Borroto carlos.borr...@gmail.com On Thu, May 10, 2012 at 4:23 PM, CHEBBI Mohamed Amine chebbimam...@gmail.com wrote: I configured the apache2.conf like above : If you are using Ubuntu or Debian, the place to put this

[galaxy-dev] Follow Up

2012-05-14 Thread Daniel Patrick Sullivan
Hi, Galaxy Developers, I sent an email to this list earlier this week regarding an issue I was having with the 'schedule jobs as user' functionality of Galaxy. I am taking a closer look at the documentation on this configuration option, and based on my reading, this feature is only supported with

Re: [galaxy-dev] GCC2012 Update

2012-05-14 Thread Dave Clements
Hello all, The original email included a link to register for GCC2011. While, gosh, that was a great meeting, it might have been more helpful to provide you with the link to this year's registration link instead: http://wiki.g2.bx.psu.edu/Events/GCC2012/Register With apologies for the

[galaxy-dev] user data upload directory structure

2012-05-14 Thread Jean-Christophe Ducom
All- Is there a way to change the upload default directory structure (/database/files) to organize files per user_id instead? something along the following lines ~galaxy-dist/database/files/postgresql_user_id0 ~galaxy-dist/database/files/postgresql_user_id1 Thank you JC