Re: [galaxy-dev] Some plugin for digital normalization

2013-12-26 Thread Michael R. Crusoe
://khmer.readthedocs.org/en/latest/install.html just substitute in the pertinent pip line from above) I haven't tested it much; doing so is the top of my to-do list for the rest of this week. If you or anyone else is feeling adventurous I would be happy to have the feedback. Cheers! -- Michael R. Crusoe

Re: [galaxy-dev] Some plugin for digital normalization

2013-12-29 Thread Michael R. Crusoe
: cannot find 'hashsize' I have tried change parameters, using the default parameters, advanced parameters but it didn't work. Do you know what am i doing wrong? Cheers! 2013/12/26 Michael R. Crusoe mcru...@msu.edu From: Cristian Alejandro Rojas alejandro.0...@gmail.com Date: December 26

Re: [galaxy-dev] Some plugin for digital normalization

2014-01-08 Thread Michael R. Crusoe
: Sorry for the late answer. Thank you so much Michael. I have tested the plugin and everything now works fine! Cheers 2013/12/29 Michael R. Crusoe mcru...@msu.edu You are doing nothing wrong Cristian, it was my error. I've updated the tool definition file; it is now at https

Re: [galaxy-dev] Concept for a Galaxy Versioned Fasta Data Retrieval Tool

2014-09-02 Thread Michael R. Crusoe
/ -- Michael R. Crusoe: Programmer Bioinformatician mcru...@msu.edu @ the Genomics, Evolution, and Development lab; Michigan State U http://ged.msu.edu/ http://orcid.org/-0002-2961-9670 @biocrusoe http://twitter.com/biocrusoe ___ Please keep all