[galaxy-dev] rpy and R

2011-06-21 Thread Ryan Davis
Hi all, I'm currently working on setting up a Galaxy on our local server. I'm going through the tool dependencies list and install everything on it. I installed the latest R version (2.12.2) and now I'm trying to install rpy 1.0.3. I have installed R with --enable-R-shlib and also done this step

Re: [galaxy-dev] rpy and R

2011-06-21 Thread Marco Moretto
Hi Ryan, it seems like your compiler can't find the R header files. I don't know on which linux distro your're running Galaxy and if you installed with a package manager it or compiled it, but you should try to install R headers (the development packages). For example in Ubuntu an apt-get install r