Re: [galaxy-dev] Variable multiple output files not appearing in history

2011-12-09 Thread Dannon Baker
Hi Graham, There was an issue with the dataset collection code that was preventing this sample wrapper from working. This has been fixed in 6426:187267753315, and the wrapper now functions properly for me, displaying all 5 files. Let me know if this works for you after you've updated.

[galaxy-dev] Error viewing BAM files in IGV

2011-12-09 Thread Alexander Graf
Hello, I have recently updated our Galaxy dist and I'm running into problems viewing BAM files in IGV (v2.0.22), saying: Invalid GZIP header. I have configured the Apache as explained in the Wiki using this *http.conf* :

[galaxy-dev] Divide FASTQ file into paired and unpaired reads (version 0.0.4) - naming suffix not recognized

2011-12-09 Thread Liisa Koski
Hi , Looks like the tool Divide FASTQ file into paired and unpaired reads is not recognizing my paired-end naming suffix @HWI-ST916:79:D04M5ACXX:1:1101:1:100326 1:N:0:TGNCCA @HWI-ST916:79:D04M5ACXX:1:1101:1:100326 2:N:0:TGNCCA Is there a patch for this or another tool/way I can divide