Hi, all,
We are in the process of setting up Galaxy as a big university
framework for the entire university and world-wide free academic access.
We currently have a portal (www.bioportal.uio.no) which is
bioinformatics oriented. The Galaxy we are setting up will give access
to more than 100
Hi Ryan,
I like that it's user-directed, and we could be there to provide input,
although if help is needed to organize the call we could probably assist with
that. I plan to be on the call as often as my schedule allows, and I believe
some of the other developers on the team would also be
We've also started a local deployment for University of Illinois
Urbana-Champaign. So I would be interested in participating.
Chris
On Apr 27, 2012, at 2:32 PM, David Hoover hoove...@helix.nih.gov wrote:
Not a bad idea. Most of the conversations on this list are very limited and
detailed
This is my code for running a samtools command internally, via Galaxy:
open INP, $ARGV[0]
or die Cannot open file: $!;
$file = $ARGV[1];
open OUT, $file
or die Cannot open file: $!;
@out = `/home/applications/samtools-0.1.7a/samtools view -bS $ARGV[0] 21`;
print OUT @out;
Hi all,
Can I ask what this line of code does?
job_wrapper.finish( stdout, stderr )
It's the one from the local.py.
Cheers,
CL
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Hi Ann
I am running an instance at The University of Sydney GMT+10 and would like to
be part of any such online talk.
Regards,
Matloob
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Hi Ryan, Ann, and everyone else
I second what Nate says (I always do :-). I too like that it is user
driven. And, while I am not a developer, I do plan on being on the call as
often as possible.
I can also offer my support for logistical and any other support. Ann,
please let me know if you
To all interested in Dave's suggestion:
IMHO, an Australian/New Zealand Galaxy user/deployer/developer group
will be worth setting up and will be viable if it solves specific
problems that aren't adequately addressed by existing networks and
communication channels - otherwise it will be JAFUG