Hi All,
We have just released the first beta version of a Galaxy API extension,
that greatly simplifies some of the typical jobs that are performed by
external jobs, that uses the Galaxy API.
Please note that this API extension project is *NOT a part of the Galaxy
project*. The Galaxy
Hi all,
I was checking out how to upload large files into Galaxy and I stumbled
upon using Data Libraries. In the tutorial, I saw that the 'Create new data
library sets' link has a dropdown next to it. When I ran our Galaxy
instance, I found out that ours has none. Is that feature available only
Hi Larry
Have you added mm10 Mouse Dec. 2011 (GRCm38/mm10) (mm10) to
~/galaxy_dist/tool-data/shared/ucsc/builds.txt
and restarted the server?
Regards, Hans
On 06/08/2012 06:19 PM, Larry Helseth wrote:
I'm trying to add mm10 to a Galaxy instance built using Mercurial on May
31st
Hello Ciara,
See the following Galaxy wiki page for details about configuring this option.
http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Uploading%20Library%20Files
Greg Von Kuster
On Jun 11, 2012, at 2:54 AM, Ciara Ledero wrote:
Hi all,
I was checking out how to upload large files
Thanks! That worked.
On Mon, Jun 11, 2012 at 2:41 AM, Hans-Rudolf Hotz h...@fmi.ch wrote:
Hi Larry
Have you added mm10Mouse Dec. 2011 (GRCm38/mm10) (mm10) to
~/galaxy_dist/tool-data/**shared/ucsc/builds.txt
and restarted the server?
Regards, Hans
On 06/08/2012 06:19 PM,
On Jun 10, 2012, at 10:36 PM, Ciara Ledero wrote:
Hi all,
I checked basics.py after reading a similar post and saw this:
self.ftp_upload_dir = kwargs.get( 'ftp_upload_dir', None )
self.ftp_upload_site = kwargs.get( 'ftp_upload_site', None )
Can you guys tell me what the
Hi,
I think this bug is already fixed in the latest galaxy-central. I upgraded to
the latest version last week or so and now it works fine again.
Best,
Sarah
- Original Message -
From: Rémy Dernat remy...@gmail.com
To: Edward Kirton eskir...@lbl.gov
Cc: galaxy-dev@lists.bx.psu.edu
On Jun 11, 2012, at 9:10 AM, Nate Coraor wrote:
On Jun 10, 2012, at 8:56 PM, Ciara Ledero wrote:
Hi all,
So I was not able to configure Galaxy immediately after this post of mine
due to the tasks that I first needed to do. Looking back, I forgot to ask
this question:
Do I need to
On Jun 11, 2012, at 3:45 PM, Fields, Christopher J wrote:
On Jun 11, 2012, at 9:10 AM, Nate Coraor wrote:
On Jun 10, 2012, at 8:56 PM, Ciara Ledero wrote:
Hi all,
So I was not able to configure Galaxy immediately after this post of mine
due to the tasks that I first needed to do.
