Re: [galaxy-dev] Set a new metadata attribute

2014-09-29 Thread Hans-Rudolf Hotz
Hi Nikos As a 'quick and dirty' work-around, I suggest generating in addition to the output file a 'log' file, which can be read by the subsequent tool. Hans-Rudolf On 09/26/2014 04:54 PM, Peter Cock wrote: On Fri, Sep 26, 2014 at 3:01 PM, Nikos Sidiropoulos nikos.sid...@gmail.com wrote:

[galaxy-dev] Question about Terms and Conditions for public galaxy server under development

2014-09-29 Thread audrey michel
Hi, We are developing a galaxy server for public usage and we would like to know if we should use the same terms and conditions as you provide for Galaxy main when we publicly launch our server: https://usegalaxy.org/static/terms.html If so, could you let us know if we can use the exact same

[galaxy-dev] bwa and bwa-mem wrappers...

2014-09-29 Thread Anton Nekrutenko
...have been committed to toolshed: https://toolshed.g2.bx.psu.edu/view/devteam/bwa_0_7_10 and github: https://github.com/nekrut/bwa-mem any feedback (especially in the form of github pull requests) is appreciated. One of the main changes is that these tools have no helper python scripts (all

Re: [galaxy-dev] Question about Terms and Conditions for public galaxy server under development

2014-09-29 Thread Anton Nekrutenko
Audrey: I do not see why not (but I'm not a lawyer of course). a. On Fri, Sep 26, 2014 at 8:41 AM, audrey michel audreymann...@gmail.com wrote: Hi, We are developing a galaxy server for public usage and we would like to know if we should use the same terms and conditions as you provide