[galaxy-dev] RPy and R installation problems

2012-07-14 Thread Chukhman, Morris
When I try to install rpy-1.0.3 against R-2.11.1 or R-2.15.1 I get the following error about the version number being unobtainable from R --version. python setup.py install --prefix=/path/to/shared/python RHOMES= [] DEBUG= True Setting RHOMES to ['/argus/app/rhel60/R_2.11.1/lib64/R'] Traceback (

[galaxy-dev] HYPHY MPI linking error

2012-07-15 Thread Chukhman, Morris
I'm getting a linker error while compiling HYPHY with the MPI make target: Linking CXX executable HYPHYMPI /opt/mvapich2_18a1/lib/libmpich.a(ibv_param.o):(.bss+0x70): multiple definition of `alpha' CMakeFiles/HYPHYMPI.dir/src/core/parser2.cpp.o:(.bss+0xa0): first defined here /usr/bin/ld: Warning: