Re: [galaxy-dev] Is there any way to restrict the access of a local Galaxy instance

2012-04-11 Thread Gianmauro Cuccuru
o to configure it? Any advise is welcome. > > Thank you! > > Tyler Hi Tyler, have a look at section "# -- Users and Security" in the universe_wsgi.ini file. There is the possibility to disable anonymous access, to delegate authentication to an upstream proxy server and to force

Re: [galaxy-dev] Interested in speaking with other institutions deploying Galaxy locally?

2012-04-30 Thread Gianmauro Cuccuru
ugs, and any add-on operations management for galaxy > being developed, etc. I'm interested. We have different local Galaxy running and we are on the way to connect them to our sequencing and genotyping platform. Glad to partecipate, Mauro -- Gianmauro Cuccuru CRS4 Bioinformatica POLARIS Edifici

Re: [galaxy-dev] Exporting histories through API

2012-06-25 Thread Gianmauro Cuccuru
On 11/07/2011 09:58 PM, Nate Coraor wrote: > On Oct 24, 2011, at 9:01 AM, Martin Dahlö wrote: > >> Hello there >> >> As the subject hints, I am trying to export histories through the API. >> Doing it through the web interface is a breeze, but has it been >> implemented in the API yet? I could not f

Re: [galaxy-dev] Which version of GATK work with Galaxy?

2012-11-30 Thread Gianmauro Cuccuru
On 11/29/2012 11:09 PM, Fenglou Mao wrote: > When I use an old version of GATK, it failed with a report "-nt" > option was not supported, I guess old GATK does not support > multi-threading. > If I use a new version of GATK, it failed with a report "-et NO_ET" > need a key file to work since new GA

Re: [galaxy-dev] blastn: Error: NCBI C++ Exception

2013-06-12 Thread Gianmauro Cuccuru
On 06/12/2013 04:06 PM, Berner, Thomas wrote: > > Hi guys, > > > another error appeared after we installed NCBI BLAST + to our local > Galaxy instance and wanted to test it. > > After uploading some testdata to our history we tried to run blastn on > it and got the following error: > > Fatal error: