Hello,
I am trying to upgrade cufflinks version from 1.3.0 to 2.0.2. I changed the
directory in the PATH to version 2.0.2 but when I run cuffdiff on the galaxy
it still uses the version 1.3.0. Do I need to change the code of the
wrapper?
Another question is how to I enable both version of
Hello,
I upgraded to the latest version running: hg pull and then hg update.
When trying to stop and start galaxy I got the following message:
$ galaxy stop
Stopping galaxy... No PID file exists in paster.pid
done.
$ galaxy start
Starting galaxy...
Entering daemon mode
...done.
Hello,
After the latest update of Galaxy I saw that the cuffdiff wrapper is for
version 2.0. I updated the $PATH to cuffdiff v. 2.0.2 but when I run
cuffdiff in Galaxy I get the following error:
Error running cuffdiff. cuffdiff: /lib64/libz.so.1: no version information
available (required by
Hello,
I am trying to run GATK on a local galaxy installation. I get the following
error:
# ERROR
--
# ERROR A USER ERROR has occurred (version 1.5-21-g979a84a):
# ERROR The invalid
Hi,
I am trying to install the tool htseq-count from the tool-shed. I had a
problem in the first installation so I uninstalled the tool and all its
dependencies (numpy, samtools 0.1.19 and pysam) from the 'manage installed
tool shed repositories) and installed it again but then I get installation
