[galaxy-dev] external chown does not chown multiple outputs .files_path

2014-05-14 Thread Pavel Fibich
it will be something in lib/galaxy/jobs/__init__.py where re-owning is triggered. My galaxy instance was updated Apr 17 2014. All the best, Pavel -- ===*** Pavel Fibichpavel.fib...@prf.jcu.cz++420-38-777-2374 Botany, Faculty of Science, University of South Bohemia Na Zlate stoce 1, 370 05 Ceske

Re: [galaxy-dev] external chown does not chown multiple outputs .files_path

2014-05-14 Thread Pavel Fibich
Hi John, thank you for advise, you are right. The tool was using command interpreter=bash seqclust-main.sh -s $input -m $mvstup -o $ovstup -d $repeatmasker -v $archive -w $contigs -y $log -x pdffile.pdf -z RMSKtable -r $__root_dir__ -t $summary -u '$summary.extra_files_path' -p $paired -f